Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium brasiliense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum, Cucumis sativus, Nicotiana benthamiana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1209398 bp
Thymine Count
1213087 bp
Guanine Count
1313952 bp
Cytosine Count
1315925 bp
Genome Length
5052362 bp
Protein-coding Genes
4234 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cyclopropane fatty acyl phospholipid synthase | F126LOC_RS08655 | Not Available | Negative | 1928279 - 1929430 | 44780.6 |
| hth-type transcriptional repressor purr | F126LOC_RS08660 | Not Available | Negative | 1929632 - 1930657 | 37917.6 |
| ynhf family membrane protein | F126LOC_RS08665 | Not Available | Positive | 1931047 - 1931136 | 3084.91 |
| c40 family peptidase | F126LOC_RS08670 | Not Available | Negative | 1931247 - 1932098 | 31405.9 |
| grx4 family monothiol glutaredoxin | F126LOC_RS08675 | Not Available | Positive | 1932440 - 1932790 | 13046.7 |
| ribonuclease t | F126LOC_RS08680 | Not Available | Negative | 1932894 - 1933565 | 24224.6 |
| lactoylglutathione lyase | F126LOC_RS08685 | Not Available | Negative | 1933712 - 1934119 | 14815.5 |
| duf1289 domain-containing protein | F126LOC_RS08690 | Not Available | Positive | 1934409 - 1934648 | 9199.97 |
| transcriptional regulator slya | F126LOC_RS08695 | Not Available | Positive | 1934876 - 1935313 | 16418.1 |
| glycine zipper 2tm domain-containing protein | F126LOC_RS08700 | Not Available | Negative | 1935445 - 1935912 | 15529.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft and black rot | Causes | PMC11676143 |
| Blackleg | Causes | PMC11676143 |
| Aerial stem rot | Causes | PMC11676143 |
| Tuber soft rot | Causes | PMC11676143 |
| Soft rot | Causes | PMC13097337 |
| Blackleg | Causes | PMC7824751 |
| Soft rot | Causes | PMC7824751 |
| Soft rot of cucumber | Causes | PMC7824751 |
| Soft-rot | Causes | PMC8270676 |
| Bacterial soft rot | Causes | PMC10673545 |
