Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium brasiliense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum, Cucumis sativus, Nicotiana benthamiana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1209398 bp
Thymine Count
1213087 bp
Guanine Count
1313952 bp
Cytosine Count
1315925 bp
Genome Length
5052362 bp
Protein-coding Genes
4234 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| quinol dehydrogenase ferredoxin subunit naph | F126LOC_RS08505 | Not Available | Negative | 1895955 - 1896818 | 31666.2 |
| ferredoxin-type protein napg | F126LOC_RS08510 | Not Available | Negative | 1896805 - 1897497 | 24816.0 |
| nitrate reductase catalytic subunit napa | F126LOC_RS08515 | Not Available | Negative | 1897503 - 1899989 | 92784.6 |
| chaperone napd | F126LOC_RS08520 | Not Available | Negative | 1899986 - 1900306 | 11368.3 |
| ferredoxin-type protein napf | F126LOC_RS08525 | Not Available | Negative | 1900303 - 1900839 | 19170.7 |
| nitrate/nitrite two-component system sensor histidine kinase narq | F126LOC_RS08530 | Not Available | Positive | 1901192 - 1902832 | 62408.6 |
| nitrate/nitrite response regulator protein narp | F126LOC_RS08535 | Not Available | Positive | 1902919 - 1903551 | 23261.1 |
| hypothetical protein | F126LOC_RS08540 | Not Available | Negative | 1903688 - 1904371 | 25303.6 |
| hypothetical protein | F126LOC_RS08545 | Not Available | Negative | 1904585 - 1905397 | 30845.1 |
| aec family transporter | F126LOC_RS08550 | Not Available | Negative | 1905954 - 1906916 | 33859.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft and black rot | Causes | PMC11676143 |
| Blackleg | Causes | PMC11676143 |
| Aerial stem rot | Causes | PMC11676143 |
| Tuber soft rot | Causes | PMC11676143 |
| Soft rot | Causes | PMC13097337 |
| Blackleg | Causes | PMC7824751 |
| Soft rot | Causes | PMC7824751 |
| Soft rot of cucumber | Causes | PMC7824751 |
| Soft-rot | Causes | PMC8270676 |
| Bacterial soft rot | Causes | PMC10673545 |
