Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium brasiliense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum, Cucumis sativus, Nicotiana benthamiana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1209398 bp
Thymine Count
1213087 bp
Guanine Count
1313952 bp
Cytosine Count
1315925 bp
Genome Length
5052362 bp
Protein-coding Genes
4234 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator beti | F126LOC_RS07805 | Not Available | Positive | 1749468 - 1750055 | 21906.6 |
| betaine-aldehyde dehydrogenase | F126LOC_RS07810 | Not Available | Positive | 1750125 - 1751597 | 53151.4 |
| choline dehydrogenase | F126LOC_RS07815 | Not Available | Positive | 1751617 - 1753296 | 62201.9 |
| tellurite resistance terb family protein | F126LOC_RS07820 | Not Available | Positive | 1753443 - 1754096 | 23744.3 |
| bifunctional 3-hydroxydecanoyl-acp dehydratase/trans-2-decenoyl-acp isomerase | F126LOC_RS07825 | Not Available | Negative | 1754191 - 1754709 | 19000.2 |
| aaa family atpase | F126LOC_RS07830 | Not Available | Negative | 1754801 - 1756570 | 66075.9 |
| macrodomain ter protein matp | F126LOC_RS07835 | Not Available | Positive | 1756749 - 1757207 | 18075.9 |
| porin ompa | F126LOC_RS07840 | Not Available | Negative | 1757360 - 1758445 | 38263.2 |
| sos-induced cell division inhibitor sula | F126LOC_RS07845 | Not Available | Negative | 1758808 - 1759314 | 18943.8 |
| tfox/sxy family dna transformation protein | F126LOC_RS07850 | Not Available | Positive | 1759538 - 1760158 | 23330.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft and black rot | Causes | PMC11676143 |
| Blackleg | Causes | PMC11676143 |
| Aerial stem rot | Causes | PMC11676143 |
| Tuber soft rot | Causes | PMC11676143 |
| Soft rot | Causes | PMC13097337 |
| Blackleg | Causes | PMC7824751 |
| Soft rot | Causes | PMC7824751 |
| Soft rot of cucumber | Causes | PMC7824751 |
| Soft-rot | Causes | PMC8270676 |
| Bacterial soft rot | Causes | PMC10673545 |
