Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium brasiliense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum, Cucumis sativus, Nicotiana benthamiana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1209398 bp
Thymine Count
1213087 bp
Guanine Count
1313952 bp
Cytosine Count
1315925 bp
Genome Length
5052362 bp
Protein-coding Genes
4234 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar hook protein flge | F126LOC_RS07605 | Not Available | Positive | 1707898 - 1709115 | 41821.4 |
| flagellar basal body rod protein flgf | F126LOC_RS07610 | Not Available | Positive | 1709137 - 1709892 | 26548.7 |
| flagellar basal-body rod protein flgg | F126LOC_RS07615 | Not Available | Positive | 1709920 - 1710702 | 27929.8 |
| flagellar basal body l-ring protein flgh | F126LOC_RS07620 | Not Available | Positive | 1710876 - 1711589 | 25255.9 |
| flagellar basal body p-ring protein flgi | F126LOC_RS07625 | Not Available | Positive | 1711606 - 1712715 | 38335.2 |
| flagellar assembly peptidoglycan hydrolase flgj | F126LOC_RS07630 | Not Available | Positive | 1712715 - 1713677 | 34644.2 |
| flagellar hook-associated protein flgk | F126LOC_RS07635 | Not Available | Positive | 1713803 - 1715497 | 59711.6 |
| flagellar hook-associated protein flgl | F126LOC_RS07640 | Not Available | Positive | 1715529 - 1716482 | 33926.6 |
| flagellar biosynthetic protein flir | F126LOC_RS07645 | Not Available | Negative | 1716867 - 1717652 | 28329.8 |
| flagellar biosynthesis protein fliq | F126LOC_RS07650 | Not Available | Negative | 1717655 - 1717924 | 9641.43 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft and black rot | Causes | PMC11676143 |
| Blackleg | Causes | PMC11676143 |
| Aerial stem rot | Causes | PMC11676143 |
| Tuber soft rot | Causes | PMC11676143 |
| Soft rot | Causes | PMC13097337 |
| Blackleg | Causes | PMC7824751 |
| Soft rot | Causes | PMC7824751 |
| Soft rot of cucumber | Causes | PMC7824751 |
| Soft-rot | Causes | PMC8270676 |
| Bacterial soft rot | Causes | PMC10673545 |
