Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium brasiliense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum, Cucumis sativus, Nicotiana benthamiana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1209398 bp
Thymine Count
1213087 bp
Guanine Count
1313952 bp
Cytosine Count
1315925 bp
Genome Length
5052362 bp
Protein-coding Genes
4234 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein phosphatase chez | F126LOC_RS07555 | Not Available | Positive | 1699971 - 1700615 | 23817.2 |
| flagellar biosynthesis protein flhb | F126LOC_RS07560 | Not Available | Positive | 1700860 - 1702011 | 42386.4 |
| flagellar biosynthesis protein flha | F126LOC_RS07565 | Not Available | Positive | 1702004 - 1704088 | 75290.1 |
| flagellar protein flhe | F126LOC_RS07570 | Not Available | Positive | 1704097 - 1704504 | 14662.5 |
| flagella synthesis protein flgn | F126LOC_RS07575 | Not Available | Negative | 1704560 - 1704997 | 16316.5 |
| flagellar biosynthesis anti-sigma factor flgm | F126LOC_RS07580 | Not Available | Negative | 1705003 - 1705299 | 10683.7 |
| flagellar basal body p-ring formation chaperone flga | F126LOC_RS07585 | Not Available | Negative | 1705441 - 1706109 | 24104.2 |
| flagellar basal body rod protein flgb | F126LOC_RS07590 | Not Available | Positive | 1706275 - 1706691 | 15211.0 |
| flagellar basal body rod protein flgc | F126LOC_RS07595 | Not Available | Positive | 1706720 - 1707124 | 14141.7 |
| flagellar hook assembly protein flgd | F126LOC_RS07600 | Not Available | Positive | 1707140 - 1707823 | 23697.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft and black rot | Causes | PMC11676143 |
| Blackleg | Causes | PMC11676143 |
| Aerial stem rot | Causes | PMC11676143 |
| Tuber soft rot | Causes | PMC11676143 |
| Soft rot | Causes | PMC13097337 |
| Blackleg | Causes | PMC7824751 |
| Soft rot | Causes | PMC7824751 |
| Soft rot of cucumber | Causes | PMC7824751 |
| Soft-rot | Causes | PMC8270676 |
| Bacterial soft rot | Causes | PMC10673545 |
