Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium brasiliense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum, Cucumis sativus, Nicotiana benthamiana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1209398 bp
Thymine Count
1213087 bp
Guanine Count
1313952 bp
Cytosine Count
1315925 bp
Genome Length
5052362 bp
Protein-coding Genes
4234 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pts trehalose transporter subunit iibc | F126LOC_RS06960 | Not Available | Negative | 1564031 - 1565449 | 51012.5 |
| gnat family n-acetyltransferase | F126LOC_RS06965 | Not Available | Negative | 1566024 - 1566584 | 21414.1 |
| phzf family phenazine biosynthesis protein | F126LOC_RS06970 | Not Available | Negative | 1566598 - 1567494 | 32470.7 |
| abc-f family atpase | F126LOC_RS06975 | Not Available | Positive | 1567612 - 1569204 | 59703.3 |
| heme/hemin abc transporter substrate-binding protein | F126LOC_RS06980 | Not Available | Negative | 1569258 - 1570082 | 28974.0 |
| tonb-dependent receptor plug domain-containing protein | F126LOC_RS06985 | Not Available | Negative | 1570094 - 1572289 | 81031.9 |
| heme anaerobic degradation radical sam methyltransferase chuw/hutw | F126LOC_RS06990 | Not Available | Positive | 1572698 - 1574011 | 49318.9 |
| heme utilization cystosolic carrier protein hutx | F126LOC_RS06995 | Not Available | Positive | 1574026 - 1574526 | 18269.8 |
| nad(p)h-binding protein | F126LOC_RS07000 | Not Available | Positive | 1574523 - 1575152 | 22268.9 |
| ylac family protein | F126LOC_RS07005 | Not Available | Positive | 1575313 - 1575789 | 18601.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft and black rot | Causes | PMC11676143 |
| Blackleg | Causes | PMC11676143 |
| Aerial stem rot | Causes | PMC11676143 |
| Tuber soft rot | Causes | PMC11676143 |
| Soft rot | Causes | PMC13097337 |
| Blackleg | Causes | PMC7824751 |
| Soft rot | Causes | PMC7824751 |
| Soft rot of cucumber | Causes | PMC7824751 |
| Soft-rot | Causes | PMC8270676 |
| Bacterial soft rot | Causes | PMC10673545 |
