Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium brasiliense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum, Cucumis sativus, Nicotiana benthamiana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1209398 bp
Thymine Count
1213087 bp
Guanine Count
1313952 bp
Cytosine Count
1315925 bp
Genome Length
5052362 bp
Protein-coding Genes
4234 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh-quinone oxidoreductase subunit nuog | F126LOC_RS06910 | Not Available | Positive | 1551543 - 1554269 | 99823.3 |
| nadh-quinone oxidoreductase subunit nuoh | F126LOC_RS06915 | Not Available | Positive | 1554266 - 1555240 | 35923.8 |
| nadh-quinone oxidoreductase subunit nuoi | F126LOC_RS06920 | Not Available | Positive | 1555258 - 1555800 | 20360.5 |
| nadh-quinone oxidoreductase subunit j | F126LOC_RS06925 | Not Available | Positive | 1555810 - 1556370 | 19908.9 |
| nadh-quinone oxidoreductase subunit nuok | F126LOC_RS06930 | Not Available | Positive | 1556367 - 1556669 | 11000.0 |
| nadh-quinone oxidoreductase subunit l | F126LOC_RS06935 | Not Available | Positive | 1556666 - 1558513 | 66664.1 |
| nadh-quinone oxidoreductase subunit m | F126LOC_RS06940 | Not Available | Positive | 1558614 - 1560149 | 56713.1 |
| nadh-quinone oxidoreductase subunit nuon | F126LOC_RS06945 | Not Available | Positive | 1560156 - 1561613 | 52308.6 |
| stress response protein elab | F126LOC_RS06950 | Not Available | Positive | 1561874 - 1562185 | 11353.7 |
| alpha,alpha-phosphotrehalase | F126LOC_RS06955 | Not Available | Negative | 1562264 - 1563955 | 65396.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft and black rot | Causes | PMC11676143 |
| Blackleg | Causes | PMC11676143 |
| Aerial stem rot | Causes | PMC11676143 |
| Tuber soft rot | Causes | PMC11676143 |
| Soft rot | Causes | PMC13097337 |
| Blackleg | Causes | PMC7824751 |
| Soft rot | Causes | PMC7824751 |
| Soft rot of cucumber | Causes | PMC7824751 |
| Soft-rot | Causes | PMC8270676 |
| Bacterial soft rot | Causes | PMC10673545 |
