Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium brasiliense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum, Cucumis sativus, Nicotiana benthamiana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1209398 bp
Thymine Count
1213087 bp
Guanine Count
1313952 bp
Cytosine Count
1315925 bp
Genome Length
5052362 bp
Protein-coding Genes
4234 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | F126LOC_RS22455 | Not Available | Negative | 1380328 - 1380456 | 4675.6 |
| maltoporin | F126LOC_RS06120 | Not Available | Negative | 1380626 - 1381933 | 48724.4 |
| hth-type transcriptional regulator galr | F126LOC_RS06125 | Not Available | Negative | 1382419 - 1383429 | 36494.8 |
| galactose-1-phosphate uridylyltransferase | F126LOC_RS06130 | Not Available | Positive | 1383893 - 1384933 | 40073.1 |
| galactokinase | F126LOC_RS06135 | Not Available | Positive | 1384943 - 1386106 | 42096.2 |
| magnesium transporter | F126LOC_RS06140 | Not Available | Negative | 1386186 - 1387664 | 54349.0 |
| marr family winged helix-turn-helix transcriptional regulator | F126LOC_RS06145 | Not Available | Positive | 1387883 - 1388332 | 16885.6 |
| organic hydroperoxide resistance protein | F126LOC_RS06150 | Not Available | Positive | 1388519 - 1388944 | 14514.4 |
| yfgg family protein | F126LOC_RS06155 | Not Available | Negative | 1389233 - 1389448 | 8153.08 |
| yjfb family protein | F126LOC_RS06160 | Not Available | Negative | 1389672 - 1389860 | 6430.73 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft and black rot | Causes | PMC11676143 |
| Blackleg | Causes | PMC11676143 |
| Aerial stem rot | Causes | PMC11676143 |
| Tuber soft rot | Causes | PMC11676143 |
| Soft rot | Causes | PMC13097337 |
| Blackleg | Causes | PMC7824751 |
| Soft rot | Causes | PMC7824751 |
| Soft rot of cucumber | Causes | PMC7824751 |
| Soft-rot | Causes | PMC8270676 |
| Bacterial soft rot | Causes | PMC10673545 |
