Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium brasiliense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum, Cucumis sativus, Nicotiana benthamiana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1209398 bp
Thymine Count
1213087 bp
Guanine Count
1313952 bp
Cytosine Count
1315925 bp
Genome Length
5052362 bp
Protein-coding Genes
4234 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadph-dependent assimilatory sulfite reductase flavoprotein subunit | F126LOC_RS04270 | Not Available | Positive | 967856 - 969685 | 67464.6 |
| assimilatory sulfite reductase (nadph) hemoprotein subunit | F126LOC_RS04275 | Not Available | Positive | 969685 - 971418 | 64936.8 |
| phosphoadenylyl-sulfate reductase | F126LOC_RS04280 | Not Available | Positive | 971431 - 972165 | 27791.9 |
| abc transporter substrate-binding protein | F126LOC_RS04285 | Not Available | Positive | 972473 - 974035 | 57780.1 |
| abc transporter atp-binding protein | F126LOC_RS04290 | Not Available | Positive | 974046 - 974918 | 30896.4 |
| abc transporter atp-binding protein | F126LOC_RS04295 | Not Available | Positive | 974915 - 975787 | 31448.2 |
| abc transporter permease | F126LOC_RS04300 | Not Available | Positive | 975781 - 976722 | 33665.5 |
| abc transporter permease | F126LOC_RS04305 | Not Available | Positive | 976719 - 977594 | 31638.8 |
| glycerophosphodiester phosphodiesterase | F126LOC_RS04310 | Not Available | Positive | 977651 - 978451 | 29856.7 |
| siroheme synthase cysg | F126LOC_RS04315 | Not Available | Positive | 978623 - 980065 | 51872.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft and black rot | Causes | PMC11676143 |
| Blackleg | Causes | PMC11676143 |
| Aerial stem rot | Causes | PMC11676143 |
| Tuber soft rot | Causes | PMC11676143 |
| Soft rot | Causes | PMC13097337 |
| Blackleg | Causes | PMC7824751 |
| Soft rot | Causes | PMC7824751 |
| Soft rot of cucumber | Causes | PMC7824751 |
| Soft-rot | Causes | PMC8270676 |
| Bacterial soft rot | Causes | PMC10673545 |
