Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium brasiliense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum, Cucumis sativus, Nicotiana benthamiana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1209398 bp
Thymine Count
1213087 bp
Guanine Count
1313952 bp
Cytosine Count
1315925 bp
Genome Length
5052362 bp
Protein-coding Genes
4234 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | F126LOC_RS17695 | Not Available | Negative | 4065928 - 4066533 | 22838.4 |
| Endodeoxyribonuclease | F126LOC_RS17700 | Not Available | Negative | 4066530 - 4066886 | 13814.8 |
| Hypothetical protein | F126LOC_RS17705 | Not Available | Negative | 4066883 - 4067167 | 10381.8 |
| Hypothetical protein | F126LOC_RS17710 | Not Available | Negative | 4067164 - 4067757 | 22297.4 |
| Hypothetical protein | F126LOC_RS17715 | Not Available | Negative | 4067827 - 4068048 | 8096.74 |
| Putative methylase | F126LOC_RS17720 | Not Available | Negative | 4068145 - 4070085 | 70202.7 |
| Putative methylase | F126LOC_RS22400 | Not Available | Negative | 4070355 - 4070828 | 18159.0 |
| hypothetical protein | F126LOC_RS17730 | Not Available | Negative | 4070821 - 4071165 | 13461.6 |
| Hypothetical protein | F126LOC_RS17735 | Not Available | Negative | 4071162 - 4072094 | 35187.8 |
| Hypothetical protein | F126LOC_RS17740 | Not Available | Negative | 4072091 - 4072342 | 9208.88 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft and black rot | Causes | PMC11676143 |
| Blackleg | Causes | PMC11676143 |
| Aerial stem rot | Causes | PMC11676143 |
| Tuber soft rot | Causes | PMC11676143 |
| Soft rot | Causes | PMC13097337 |
| Blackleg | Causes | PMC7824751 |
| Soft rot | Causes | PMC7824751 |
| Soft rot of cucumber | Causes | PMC7824751 |
| Soft-rot | Causes | PMC8270676 |
| Bacterial soft rot | Causes | PMC10673545 |
