Roseburia intestinalis

Gram-positiveRodNon-motileAnaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Roseburia

Description

Roseburia intestinalis is a Gram-positive, rod-shaped microbe that thrives in mesophilic temperatures, classified as a Chemoheterotroph, and can be found in various body sites, including the gastrointestinal tract, of numerous species. As an Obligate Anaerobe, it requires a strict absence of oxygen to survive. The Gram-positive characteristic is due to the presence of a thick peptidoglycan layer in its cell wall, which retains the crystal violet stain during the Gram staining process. Its rod shape is typical of many bacterial species, allowing for efficient movement and absorption of nutrients. As a mesophilic microbe, Roseburia intestinalis grows best in temperatures ranging from 20-45°C, which is ideal for its habitat in the human gut. As a Chemoheterotroph, Roseburia intestinalis relies on organic compounds for energy and carbon sources, breaking down complex molecules into simpler ones. This metabolic process is crucial for its survival and allows it to interact with other microorganisms in its ecosystem. The ability to inhabit various body sites, including the gut, skin, and respiratory tract, of different species, highlights its adaptability and versatility. The strict requirement for anaerobic conditions is a result of its evolved metabolic pathways, which are sensitive to oxygen. Roseburia intestinalis has been implicated in the production of short-chain fatty acids, particularly butyrate, which plays a crucial role in maintaining gut health and regulating the immune system. Its presence in the gut microbiome has been linked to various health benefits, including improved glucose metabolism and enhanced immune function. The unique combination of characteristics in Roseburia intestinalis makes it a key player in the complex ecosystem of the human gut, where it contributes to the balance and diversity of the microbiome.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusRoseburia
SpeciesRoseburia intestinalis
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Image of Roseburia intestinalis
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatAnimal intestinal microflora
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Roseburia intestinalis strain AM43-11 AM43-11.Scaf91, whole genome

Gene Summary

Adenine Count

1256362 bp

Thymine Count

1246828 bp

Guanine Count

915355 bp

Cytosine Count

918483 bp

Genome Length

4337927 bp

Protein-coding Genes

3846 genes

Non-Coding Genes

118 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna topoisomerase (atp-hydrolyzing) subunit bDW927_17120Not AvailableNegative3662887 - 366482471884.3
dna replication/repair protein recfDW927_17125Not AvailableNegative3664829 - 366593542333.9
rna-binding s4 domain-containing proteinDW927_17130Not AvailableNegative3665932 - 36661477815.45
dna polymerase iii subunit betaDW927_17135Not AvailableNegative3666211 - 366732341607.3
chromosomal replication initiator protein dnaaDW927_17140Not AvailableNegative3667661 - 366901951484.6
50s ribosomal protein l34DW927_17145Not AvailablePositive3669699 - 36698335072.48
ribonuclease p protein componentDW927_17150Not AvailablePositive3670011 - 367034913001.7
membrane protein insertion efficiency factor yiddDW927_17155Not AvailablePositive3670378 - 36705877776.84
membrane protein insertase yidcDW927_17160Not AvailablePositive3670612 - 367190448027.0
protein jagDW927_17165Not AvailablePositive3671927 - 367255323868.7

Displaying genes 3311 – 3320 of 3964 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

79 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000503L-rhamnoseC6H12O5Chemical structure of L-rhamnose3615-41-6
Average164.1565Da
Monoisotopic164.0684735Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0002051D-fructoseC6H12O6Chemical structure of D-fructose57-48-7
Average180.1559Da
Monoisotopic180.0633881Da
BASm0014031Butyric acidC4H8O2Chemical structure of Butyric acid107-92-6
Average88.1051Da
Monoisotopic88.0524295Da
BASm0014032Acetic acidC2H4O2Chemical structure of Acetic acid64-19-7
Average60.052Da
Monoisotopic60.021129372Da
BASm0014039L-Lactic acidC3H6O3Chemical structure of L-Lactic acid79-33-4
Average90.0779Da
Monoisotopic90.031694058Da
BASm0014040Indoleacetic acidC10H9NO2Chemical structure of Indoleacetic acid87-51-4
Average175.184Da
Monoisotopic175.063328537Da
BASm0014045Propionic acidC3H6O2Chemical structure of Propionic acid79-09-4
Average74.0785Da
Monoisotopic74.036779436Da
BASm0014055Linoleic acidC18H32O2Chemical structure of Linoleic acid60-33-3
Average280.4455Da
Monoisotopic280.240230268Da
BASm0014064Arachidonic acidC20H32O2Chemical structure of Arachidonic acid506-32-1
Average304.4669Da
Monoisotopic304.240230268Da

Displaying 1–10 of 79 metabolites

Health Effects

No health effects information available for this bacterium.