Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Roseburia |
| Species | Roseburia inulinivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Roseburia inulinivorans DSM 16841
Accession NumberACFY00000000.1
Gene Summary
Adenine Count
1173957 bp
Thymine Count
1177058 bp
Guanine Count
844636 bp
Cytosine Count
852811 bp
Genome Length
4048462 bp
Protein-coding Genes
4415 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 5s ribosomal rna | Not Available | Not Available | + | 148 - 262 | Not Available |
| crispr-associated endonuclease cas3-hd | ROSEINA2194_00001 | Not Available | + | 211 - 783 | 21899.1 |
| crispr-associated helicase cas3 | ROSEINA2194_00002 | Not Available | + | 780 - 2405 | 62520.8 |
| hypothetical protein | ROSEINA2194_00003 | Not Available | + | 2426 - 2569 | 5556.72 |
| crispr-associated protein cas5, dvulg subtype | ROSEINA2194_00004 | Not Available | + | 2587 - 3330 | 29005.5 |
| crispr-associated protein, csd1 family | ROSEINA2194_00005 | Not Available | + | 3323 - 5242 | 73245.0 |
| hypothetical protein | ROSEINA2194_00006 | Not Available | + | 5242 - 6087 | 31533.3 |
| crispr-associated protein cas4 | ROSEINA2194_00007 | Not Available | + | 6074 - 6751 | 26165.4 |
| Ncrna_class:srp_rna | Not Available | Not Available | + | 6085 - 6187 | Not Available |
| crispr-associated endonuclease cas1, dvulg subtype | ROSEINA2194_00008 | Not Available | + | 6748 - 7779 | 39521.1 |
Pathways
160 pathways
Pyruvate Decarboxylation to Acetyl-CoA
Pyruvate Decarboxylation to Acetyl-CoA
Serine Biosynthesis and Metabolism
Serine Biosynthesis and Metabolism
Conversion of Succinate to Propanoate
Conversion of Succinate to Propanoate
Ribose Degradation
Ribose Degradation
D-Arabinose Degradation I
D-Arabinose Degradation I
D-Allulose Degradation
D-Allulose Degradation
Trehalose Degradation I (Low Osmolarity)
Trehalose Degradation I (Low Osmolarity)
Ethylene Glycol Degradation
Ethylene Glycol Degradation
