Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Segatella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Segatella |
| Species | Segatella copri |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Segatella copri strain TF06-40 TF06-40.Scaf100, whole genome
Gene Summary
Adenine Count
1014685 bp
Thymine Count
1018756 bp
Guanine Count
833043 bp
Cytosine Count
826587 bp
Genome Length
3693570 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isochorismate synthase | DXC61_00345 | Not Available | Negative | 91230 - 92408 | 43987.3 |
| paai family thioesterase | DXC61_00350 | Not Available | Negative | 92405 - 92851 | 15805.1 |
| hypothetical protein | DXC61_00355 | Not Available | Negative | 92880 - 93131 | 10089.6 |
| lysine--trna ligase | DXC61_00360 | Not Available | Positive | 93124 - 94854 | 65964.4 |
| glycerol-3-phosphate dehydrogenase | DXC61_00365 | Not Available | Positive | 94993 - 95991 | 37437.2 |
| glucose-6-phosphate isomerase | DXC61_00370 | Not Available | Positive | 96076 - 97431 | 49449.0 |
| had family hydrolase | DXC61_00375 | Not Available | Positive | 97435 - 98160 | 26839.5 |
| gdp-mannose 4,6-dehydratase | DXC61_00380 | Not Available | Positive | 98226 - 99335 | 41896.8 |
| gdp-l-fucose synthase | DXC61_00385 | Not Available | Positive | 99341 - 100546 | 45038.9 |
| uracil-xanthine permease | DXC61_00390 | Not Available | Positive | 100562 - 101764 | 41795.6 |
Pathways
174 pathways
Health Effects
No health effects information available for this bacterium.
