Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Segatella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Segatella |
| Species | Segatella copri |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Segatella copri strain TF06-40 TF06-40.Scaf100, whole genome
Gene Summary
Adenine Count
1014685 bp
Thymine Count
1018756 bp
Guanine Count
833043 bp
Cytosine Count
826587 bp
Genome Length
3693570 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase xylanase | DXC61_00045 | Not Available | Negative | 11961 - 12893 | 33675.4 |
| dtdp-glucose 4,6-dehydratase | DXC61_00050 | Not Available | Negative | 13193 - 14326 | 43546.6 |
| dtdp-4-dehydrorhamnose reductase | DXC61_00055 | Not Available | Negative | 14360 - 15232 | 32278.3 |
| hypothetical protein | DXC61_00060 | Not Available | Positive | 15950 - 17596 | 64534.6 |
| sdr family nad(p)-dependent oxidoreductase | DXC61_00065 | Not Available | Negative | 17792 - 18547 | 27206.4 |
| histidine phosphatase family protein | DXC61_00070 | Not Available | Negative | 18634 - 19140 | 19086.2 |
| duf308 domain-containing protein | DXC61_00075 | Not Available | Positive | 19423 - 20073 | 23925.4 |
| penicillin-binding protein | DXC61_00080 | Not Available | Positive | 20101 - 22650 | 96086.9 |
| hypothetical protein | DXC61_00085 | Not Available | Positive | 22758 - 24494 | 66916.6 |
| lps-assembly protein lptd | DXC61_00090 | Not Available | Negative | 24616 - 27480 | 108201.0 |
Pathways
174 pathways
Health Effects
No health effects information available for this bacterium.
