Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Segatella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Segatella |
| Species | Segatella copri |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Segatella copri strain TF06-40 TF06-40.Scaf100, whole genome
Gene Summary
Adenine Count
1014685 bp
Thymine Count
1018756 bp
Guanine Count
833043 bp
Cytosine Count
826587 bp
Genome Length
3693570 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DXB80_11920 | Not Available | Negative | 2945826 - 2948915 | 115247.0 |
| glucanase | DXB80_11925 | Not Available | Negative | 2948933 - 2950816 | 69107.3 |
| helix-turn-helix domain-containing protein | DXB80_11930 | Not Available | Negative | 2951165 - 2954158 | 111689.0 |
| hypothetical protein | DXB80_11935 | Not Available | Negative | 2954378 - 2954563 | 6930.58 |
| alpha-amylase | DXB80_11940 | Not Available | Negative | 2954709 - 2956634 | 73150.8 |
| type i pullulanase | DXB80_11945 | Not Available | Negative | 2956659 - 2958611 | 73134.3 |
| glycoside hydrolase family 97 protein | DXB80_11950 | Not Available | Negative | 2958743 - 2960878 | 80902.7 |
| 4-alpha-glucanotransferase | DXB80_11955 | Not Available | Negative | 2961065 - 2963740 | 103951.0 |
| mfs transporter | DXB80_11960 | Not Available | Negative | 2963918 - 2965252 | 48655.1 |
| laci family transcriptional regulator | DXB80_11965 | Not Available | Negative | 2965273 - 2966298 | 38329.0 |
Pathways
174 pathways
Health Effects
No health effects information available for this bacterium.
