Segatella copri

Gram-negativeRodAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Prevotellaceae

Genus

Segatella

Description

Segatella copri is a Gram-negative, anaerobic bacterium that inhabits the gastrointestinal tract of various hosts. This microbe is part of the complex microbial community within the gut, where it plays a role in the overall microbiota composition and metabolic processes. As an anaerobe, Segatella copri thrives in oxygen-depleted environments, which are characteristic of the intestinal niche. The Gram-negative nature of Segatella copri implies that its cellular structure includes a thin peptidoglycan layer surrounded by an outer membrane containing lipopolysaccharides. This structural feature may influence its interactions with the host's immune system and its resilience within the gut environment. Understanding the specific metabolic activities and interactions of Segatella copri within the gut microbiome could provide valuable insights into its potential roles in digestion, nutrient absorption, and overall gut health. The presence of this bacterium in the gut suggests a possible contribution to the maintenance of microbial diversity, which is crucial for a balanced and functional microbiome. Further research into Segatella copri could elucidate its specific contributions to gut ecology and its interactions with other microbial species, highlighting its significance in the complex interplay of gut microbiota.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyPrevotellaceae
GenusSegatella
SpeciesSegatella copri
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgut
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Segatella copri strain TF06-40 TF06-40.Scaf100, whole genome

Gene Summary

Adenine Count

1014685 bp

Thymine Count

1018756 bp

Guanine Count

833043 bp

Cytosine Count

826587 bp

Genome Length

3693570 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

7

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
plp-dependent transferaseDXB80_11715Not AvailablePositive2890388 - 289157243584.1
putative c-s lyaseDXB80_11720Not AvailablePositive2891593 - 289278645778.1
helicaseDXB80_11725Not AvailableNegative2892862 - 289504882797.5
nitroreductaseDXB80_11730Not AvailableNegative2895108 - 289562920191.1
y-family dna polymeraseDXB80_11735Not AvailablePositive2895801 - 289718652257.5
peptidase s24DXB80_11740Not AvailablePositive2897246 - 289764114827.6
mfs transporterDXB80_11745Not AvailableNegative2897746 - 289905347866.3
mannitol dehydrogenase family proteinDXB80_11750Not AvailableNegative2899162 - 290065855696.1
hypothetical proteinDXB80_11755Not AvailablePositive2900703 - 29009188500.49
laci family transcriptional regulatorDXB80_11760Not AvailableNegative2900919 - 290192338222.7

Displaying genes 8681 – 8690 of 18638 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.