Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Segatella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Segatella |
| Species | Segatella copri |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Segatella copri strain TF06-40 TF06-40.Scaf100, whole genome
Gene Summary
Adenine Count
1014685 bp
Thymine Count
1018756 bp
Guanine Count
833043 bp
Cytosine Count
826587 bp
Genome Length
3693570 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-amylase | DXB80_11605 | Not Available | Negative | 2858436 - 2860163 | 64748.3 |
| glycoside hydrolase family 97 protein | DXB80_11610 | Not Available | Negative | 2860230 - 2862332 | 78886.3 |
| ragb/susd family nutrient uptake outer membrane protein | DXB80_11615 | Not Available | Negative | 2862450 - 2864177 | 64533.4 |
| susc/raga family tonb-linked outer membrane protein | DXB80_11620 | Not Available | Negative | 2864249 - 2867224 | 109421.0 |
| hypothetical protein | DXB80_11625 | Not Available | Positive | 2867453 - 2869090 | 63442.6 |
| hypothetical protein | DXB80_11630 | Not Available | Negative | 2869515 - 2870153 | 25355.2 |
| duf1232 domain-containing protein | DXB80_11635 | Not Available | Negative | 2870229 - 2870636 | 15015.2 |
| hypothetical protein | DXB80_11640 | Not Available | Negative | 2870683 - 2871120 | 16561.5 |
| do family serine endopeptidase | DXB80_11650 | Not Available | Positive | 2872057 - 2873526 | 51866.9 |
| rna polymerase sigma factor rpod/siga | DXB80_11655 | Not Available | Positive | 2873710 - 2874573 | 32938.4 |
Pathways
174 pathways
Health Effects
No health effects information available for this bacterium.
