Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Segatella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Segatella |
| Species | Segatella copri |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Segatella copri strain TF06-40 TF06-40.Scaf100, whole genome
Gene Summary
Adenine Count
1014685 bp
Thymine Count
1018756 bp
Guanine Count
833043 bp
Cytosine Count
826587 bp
Genome Length
3693570 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad kinase | DXB80_11185 | Not Available | Negative | 2756067 - 2756957 | 32747.2 |
| dj-1 family protein | DXB80_11190 | Not Available | Positive | 2757041 - 2757613 | 20583.6 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | DXB80_11195 | Not Available | Positive | 2757655 - 2758323 | 24825.5 |
| hypothetical protein | DXB80_11200 | Not Available | Negative | 2758295 - 2760310 | 76473.1 |
| atp-dependent dna helicase recg | DXB80_11205 | Not Available | Positive | 2760350 - 2762446 | 79640.9 |
| hypothetical protein | DXB80_11210 | Not Available | Positive | 2762601 - 2762921 | 12503.4 |
| lysm peptidoglycan-binding domain-containing protein | DXB80_11215 | Not Available | Positive | 2763157 - 2764107 | 35338.1 |
| rip metalloprotease rsep | DXB80_11220 | Not Available | Negative | 2764202 - 2765584 | 51986.5 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | DXB80_11225 | Not Available | Negative | 2765695 - 2766855 | 42707.5 |
| 16s rrna processing protein rimm | DXB80_11230 | Not Available | Negative | 2766867 - 2767388 | 19613.1 |
Pathways
174 pathways
Health Effects
No health effects information available for this bacterium.
