Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Segatella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Segatella |
| Species | Segatella copri |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Segatella copri strain TF06-40 TF06-40.Scaf100, whole genome
Gene Summary
Adenine Count
1014685 bp
Thymine Count
1018756 bp
Guanine Count
833043 bp
Cytosine Count
826587 bp
Genome Length
3693570 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exopolygalacturonase | DXB80_10620 | Not Available | Positive | 2609843 - 2611234 | 51927.9 |
| abc transporter atp-binding protein | DXB80_10625 | Not Available | Positive | 2611409 - 2612155 | 26808.1 |
| gntr family transcriptional regulator | DXB80_10630 | Not Available | Positive | 2612152 - 2612994 | 32454.9 |
| tlpa family protein disulfide reductase | DXB80_10635 | Not Available | Negative | 2613333 - 2615234 | 70962.9 |
| hypothetical protein | DXB80_10640 | Not Available | Negative | 2615393 - 2615674 | 10636.3 |
| 2-oxoglutarate ferredoxin oxidoreductase subunit gamma | DXB80_10645 | Not Available | Negative | 2615927 - 2616472 | 19834.5 |
| 2-oxoglutarate oxidoreductase | DXB80_10650 | Not Available | Negative | 2616527 - 2617291 | 27907.7 |
| 3-methyl-2-oxobutanoate dehydrogenase subunit vorb | DXB80_10655 | Not Available | Negative | 2617288 - 2618370 | 39273.7 |
| 4fe-4s dicluster domain-containing protein | DXB80_10660 | Not Available | Negative | 2618374 - 2618604 | 8075.93 |
| tetratricopeptide repeat protein | DXB80_10665 | Not Available | Negative | 2618674 - 2618853 | 6881.06 |
Pathways
174 pathways
Health Effects
No health effects information available for this bacterium.
