Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Segatella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Segatella |
| Species | Segatella copri |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Segatella copri strain TF06-40 TF06-40.Scaf100, whole genome
Gene Summary
Adenine Count
1014685 bp
Thymine Count
1018756 bp
Guanine Count
833043 bp
Cytosine Count
826587 bp
Genome Length
3693570 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphopyruvate hydratase | DXB80_09880 | Not Available | Positive | 2423250 - 2424557 | 47070.1 |
| zip family metal transporter | DXB80_09885 | Not Available | Positive | 2424746 - 2425492 | 26287.9 |
| hypothetical protein | DXB80_09890 | Not Available | Negative | 2425493 - 2425576 | 3235.31 |
| kila-n domain-containing protein | DXB80_09895 | Not Available | Positive | 2425686 - 2426489 | 30919.2 |
| glutamine synthetase type iii | DXB80_09905 | Not Available | Negative | 2427010 - 2429199 | 82204.4 |
| ll-diaminopimelate aminotransferase | DXB80_09910 | Not Available | Negative | 2429244 - 2430476 | 46281.2 |
| diaminopimelate epimerase | DXB80_09915 | Not Available | Negative | 2430687 - 2431532 | 31066.9 |
| hypothetical protein | DXB80_09920 | Not Available | Positive | 2431677 - 2431922 | 9872.82 |
| p-ii family nitrogen regulator | DXB80_09925 | Not Available | Positive | 2431987 - 2432343 | 13406.2 |
| ammonium transporter | DXB80_09930 | Not Available | Positive | 2432456 - 2433724 | 45126.6 |
Pathways
174 pathways
Health Effects
No health effects information available for this bacterium.
