Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Segatella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Segatella |
| Species | Segatella copri |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Segatella copri strain TF06-40 TF06-40.Scaf100, whole genome
Gene Summary
Adenine Count
1014685 bp
Thymine Count
1018756 bp
Guanine Count
833043 bp
Cytosine Count
826587 bp
Genome Length
3693570 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fha domain-containing protein | DXB80_09775 | Not Available | Positive | 2402848 - 2403384 | 20138.1 |
| imidazole glycerol phosphate synthase subunit hish | DXB80_09780 | Not Available | Positive | 2403614 - 2404252 | 24173.9 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | DXB80_09785 | Not Available | Positive | 2404269 - 2404985 | 25990.3 |
| imidazole glycerol phosphate synthase subunit hisf | DXB80_09790 | Not Available | Positive | 2405046 - 2405825 | 27994.3 |
| bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp diphosphatase hisie | DXB80_09795 | Not Available | Positive | 2405887 - 2406534 | 24454.3 |
| atp-binding cassette domain-containing protein | DXB80_09800 | Not Available | Positive | 2406567 - 2407283 | 27077.6 |
| aspartate kinase | DXB80_09805 | Not Available | Positive | 2407311 - 2408633 | 49175.0 |
| diaminopimelate decarboxylase | DXB80_09810 | Not Available | Positive | 2408773 - 2409930 | 42728.3 |
| glycosyltransferase | DXB80_09815 | Not Available | Positive | 2410006 - 2411148 | 43998.4 |
| hypothetical protein | DXB80_09820 | Not Available | Positive | 2411211 - 2411984 | 29619.2 |
Pathways
174 pathways
Health Effects
No health effects information available for this bacterium.
