Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Segatella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Segatella |
| Species | Segatella copri |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Segatella copri strain TF06-40 TF06-40.Scaf100, whole genome
Gene Summary
Adenine Count
1014685 bp
Thymine Count
1018756 bp
Guanine Count
833043 bp
Cytosine Count
826587 bp
Genome Length
3693570 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine protease | DXB80_09195 | Not Available | Positive | 2271002 - 2272087 | 41478.9 |
| hypothetical protein | DXB80_09200 | Not Available | Positive | 2273006 - 2273650 | 25355.2 |
| rna polymerase sigma-54 factor | DXB80_09205 | Not Available | Positive | 2273653 - 2275176 | 58245.7 |
| phosphatase pap2 family protein | DXB80_09210 | Not Available | Positive | 2275259 - 2275867 | 22729.2 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | DXB80_09215 | Not Available | Positive | 2275893 - 2276399 | 17460.6 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | DXB80_09220 | Not Available | Positive | 2276452 - 2278320 | 68565.2 |
| dna-binding response regulator | DXB80_09225 | Not Available | Positive | 2278588 - 2279295 | 26305.8 |
| hypothetical protein | DXB80_09230 | Not Available | Positive | 2279385 - 2280197 | 30850.9 |
| sensor histidine kinase | DXB80_09235 | Not Available | Positive | 2280210 - 2281166 | 36215.1 |
| duf3108 domain-containing protein | DXB80_09240 | Not Available | Negative | 2281234 - 2282046 | 31169.8 |
Pathways
174 pathways
Health Effects
No health effects information available for this bacterium.
