Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Segatella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Segatella |
| Species | Segatella copri |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Segatella copri strain TF06-40 TF06-40.Scaf100, whole genome
Gene Summary
Adenine Count
1014685 bp
Thymine Count
1018756 bp
Guanine Count
833043 bp
Cytosine Count
826587 bp
Genome Length
3693570 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXB80_08895 | Not Available | Negative | 2183467 - 2183697 | 8790.49 |
| efflux rnd transporter periplasmic adaptor subunit | DXB80_08900 | Not Available | Positive | 2183760 - 2184815 | 37535.1 |
| acrb/acrd/acrf family protein | DXB80_08905 | Not Available | Positive | 2184992 - 2188030 | 112976.0 |
| cation:proton antiporter | DXB80_08910 | Not Available | Positive | 2188263 - 2190392 | 80597.2 |
| glycoside hydrolase family 2 protein | DXB80_08915 | Not Available | Negative | 2190454 - 2192922 | 93028.1 |
| rhamnogalacturonan acetylesterase | DXB80_08920 | Not Available | Negative | 2192938 - 2194194 | 47269.5 |
| duf4450 domain-containing protein | DXB80_08925 | Not Available | Negative | 2194333 - 2197347 | 113585.0 |
| rhamnogalacturonan acetylesterase | DXB80_08930 | Not Available | Negative | 2197424 - 2198968 | 58069.9 |
| rhamnogalacturonan lyase | DXB80_08935 | Not Available | Negative | 2199116 - 2201200 | 77728.5 |
| ragb/susd family nutrient uptake outer membrane protein | DXB80_08940 | Not Available | Negative | 2201448 - 2203631 | 81615.5 |
Pathways
174 pathways
Health Effects
No health effects information available for this bacterium.
