Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Segatella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Segatella |
| Species | Segatella copri |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Segatella copri strain TF06-40 TF06-40.Scaf100, whole genome
Gene Summary
Adenine Count
1014685 bp
Thymine Count
1018756 bp
Guanine Count
833043 bp
Cytosine Count
826587 bp
Genome Length
3693570 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding protein | DXB80_06375 | Not Available | Positive | 1583314 - 1583868 | 19364.9 |
| abc transporter substrate-binding protein | DXB80_06380 | Not Available | Negative | 1583964 - 1584551 | 21930.7 |
| dna-binding response regulator | DXB80_06385 | Not Available | Negative | 1584579 - 1585304 | 27144.1 |
| duf5112 domain-containing protein | DXB80_06390 | Not Available | Negative | 1585325 - 1588672 | 127821.0 |
| bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | DXB80_06395 | Not Available | Negative | 1588723 - 1589394 | 23778.0 |
| sugar kinase | DXB80_06400 | Not Available | Negative | 1589557 - 1590579 | 37132.1 |
| hypothetical protein | DXB80_06405 | Not Available | Negative | 1590618 - 1590836 | 8675.59 |
| laci family transcriptional regulator | DXB80_06410 | Not Available | Positive | 1590974 - 1592038 | 41119.6 |
| altronate dehydratase | DXB80_06415 | Not Available | Positive | 1592129 - 1593625 | 54139.7 |
| na+/h+ antiporter nhac family protein | DXB80_06420 | Not Available | Positive | 1593645 - 1594955 | 45520.1 |
Pathways
174 pathways
Health Effects
No health effects information available for this bacterium.
