Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Segatella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Segatella |
| Species | Segatella copri |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Segatella copri strain TF06-40 TF06-40.Scaf100, whole genome
Gene Summary
Adenine Count
1014685 bp
Thymine Count
1018756 bp
Guanine Count
833043 bp
Cytosine Count
826587 bp
Genome Length
3693570 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chondroitin lyase | DXB80_04595 | Not Available | Positive | 1165541 - 1167739 | 82975.7 |
| cupin domain-containing protein | DXB80_04600 | Not Available | Positive | 1167755 - 1168096 | 12591.2 |
| mfs transporter | DXB80_04605 | Not Available | Positive | 1168104 - 1169567 | 53845.3 |
| sdr family nad(p)-dependent oxidoreductase | DXB80_04610 | Not Available | Positive | 1169615 - 1170370 | 26693.8 |
| hypothetical protein | DXB80_04615 | Not Available | Positive | 1170388 - 1171581 | 45384.9 |
| alpha/beta hydrolase | DXB80_04620 | Not Available | Positive | 1171636 - 1172631 | 36277.2 |
| sugar kinase | DXB80_04625 | Not Available | Positive | 1172780 - 1173802 | 37262.2 |
| bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | DXB80_04630 | Not Available | Positive | 1174037 - 1174702 | 23505.6 |
| nad(p)-dependent oxidoreductase | DXB80_04635 | Not Available | Positive | 1174728 - 1176089 | 49461.6 |
| is1380 family transposase | DXB80_04650 | Not Available | Negative | 1178170 - 1178763 | 23575.4 |
Pathways
174 pathways
Health Effects
No health effects information available for this bacterium.
