Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Segatella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Segatella |
| Species | Segatella copri |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Segatella copri strain TF06-40 TF06-40.Scaf100, whole genome
Gene Summary
Adenine Count
1014685 bp
Thymine Count
1018756 bp
Guanine Count
833043 bp
Cytosine Count
826587 bp
Genome Length
3693570 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease h | DXB80_03300 | Not Available | Positive | 825076 - 825549 | 17720.3 |
| rna polymerase sigma-70 factor | DXB80_03305 | Not Available | Positive | 825662 - 826219 | 22044.9 |
| fecr family protein | DXB80_03310 | Not Available | Positive | 826261 - 827271 | 38312.6 |
| had family phosphatase | DXB80_03315 | Not Available | Positive | 827392 - 827994 | 23790.4 |
| type ii toxin-antitoxin system rele/pare family toxin | DXB80_03320 | Not Available | Positive | 828068 - 828406 | 13365.4 |
| xre family transcriptional regulator | DXB80_03325 | Not Available | Positive | 828409 - 828720 | 11662.2 |
| susc/raga family tonb-linked outer membrane protein | DXB80_03330 | Not Available | Positive | 829092 - 832427 | 122620.0 |
| ragb/susd family nutrient uptake outer membrane protein | DXB80_03335 | Not Available | Positive | 832483 - 833835 | 51105.3 |
| hypothetical protein | DXB80_03340 | Not Available | Positive | 833892 - 834935 | 39288.8 |
| glycerophosphodiester phosphodiesterase | DXB80_03345 | Not Available | Positive | 834952 - 835851 | 34171.9 |
Pathways
174 pathways
Health Effects
No health effects information available for this bacterium.
