Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Segatella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Segatella |
| Species | Segatella copri |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Segatella copri strain TF06-40 TF06-40.Scaf100, whole genome
Gene Summary
Adenine Count
1014685 bp
Thymine Count
1018756 bp
Guanine Count
833043 bp
Cytosine Count
826587 bp
Genome Length
3693570 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exodeoxyribonuclease iii | DXB80_03190 | Not Available | Positive | 794173 - 794925 | 29645.8 |
| hypothetical protein | DXB80_03195 | Not Available | Negative | 795154 - 795660 | 19210.0 |
| zinc-dependent metalloproteinase lipoprotein | DXB80_03200 | Not Available | Positive | 796042 - 797250 | 46491.5 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | DXB80_03205 | Not Available | Positive | 797292 - 798536 | 46271.6 |
| hypothetical protein | DXB80_03210 | Not Available | Positive | 798550 - 798933 | 14363.8 |
| metal abc transporter permease | DXB80_03215 | Not Available | Positive | 798972 - 799772 | 28754.5 |
| hypothetical protein | DXB80_03220 | Not Available | Positive | 799821 - 802970 | 120593.0 |
| rna polymerase sigma-70 factor | DXB80_03225 | Not Available | Positive | 802983 - 803555 | 22693.5 |
| fecr family protein | DXB80_03230 | Not Available | Positive | 803609 - 804559 | 35512.8 |
| glycoside hydrolase | DXB80_03235 | Not Available | Negative | 804731 - 806611 | 71601.6 |
Pathways
174 pathways
Health Effects
No health effects information available for this bacterium.
