Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Segatella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Segatella |
| Species | Segatella copri |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Segatella copri strain TF06-40 TF06-40.Scaf100, whole genome
Gene Summary
Adenine Count
1014685 bp
Thymine Count
1018756 bp
Guanine Count
833043 bp
Cytosine Count
826587 bp
Genome Length
3693570 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-glucosidase | DXB80_02880 | Not Available | Negative | 711906 - 714224 | 86292.1 |
| hypothetical protein | DXB80_02885 | Not Available | Negative | 714275 - 715273 | 35887.7 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DXB80_02890 | Not Available | Negative | 715334 - 717109 | 66889.8 |
| susc/raga family tonb-linked outer membrane protein | DXB80_02895 | Not Available | Negative | 717168 - 720344 | 115705.0 |
| glycoside hydrolase family 5 protein | DXB80_02900 | Not Available | Negative | 720373 - 721593 | 46120.2 |
| response regulator | DXB80_02905 | Not Available | Negative | 721772 - 725821 | 152071.0 |
| m18 family aminopeptidase | DXB80_02910 | Not Available | Positive | 726030 - 727316 | 46881.2 |
| atp-binding protein | DXB80_02915 | Not Available | Negative | 727461 - 728771 | 49915.5 |
| hypothetical protein | DXB80_02920 | Not Available | Negative | 728764 - 728964 | 7885.08 |
| transcriptional regulator | DXB80_02925 | Not Available | Negative | 728986 - 730635 | 63692.4 |
Pathways
174 pathways
Health Effects
No health effects information available for this bacterium.
