Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Segatella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Segatella |
| Species | Segatella copri |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Segatella copri strain TF06-40 TF06-40.Scaf100, whole genome
Gene Summary
Adenine Count
1014685 bp
Thymine Count
1018756 bp
Guanine Count
833043 bp
Cytosine Count
826587 bp
Genome Length
3693570 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | DXB80_02175 | Not Available | Negative | 559012 - 560817 | 67647.7 |
| susc/raga family tonb-linked outer membrane protein | DXB80_02180 | Not Available | Negative | 560840 - 563707 | 106398.0 |
| ragb/susd family nutrient uptake outer membrane protein | DXB80_02185 | Not Available | Negative | 563747 - 565681 | 73301.4 |
| tonb-dependent receptor | DXB80_02190 | Not Available | Negative | 565731 - 568877 | 116890.0 |
| hypothetical protein | DXB80_02195 | Not Available | Negative | 568999 - 570420 | 53842.3 |
| hybrid sensor histidine kinase/response regulator | DXB80_02200 | Not Available | Positive | 570919 - 574977 | 152703.0 |
| glycoside hydrolase family 43 protein | DXB80_02205 | Not Available | Positive | 575185 - 576855 | 62033.5 |
| bifunctional metallophosphatase/5'-nucleotidase | DXB80_02210 | Not Available | Negative | 576944 - 577822 | 32398.6 |
| hypothetical protein | DXB80_02215 | Not Available | Negative | 577856 - 578632 | 28858.1 |
| 50s ribosomal protein l19 | DXB80_02220 | Not Available | Positive | 578901 - 579266 | 13537.7 |
Pathways
174 pathways
Health Effects
No health effects information available for this bacterium.
