Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Segatella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Segatella |
| Species | Segatella copri |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Segatella copri strain TF06-40 TF06-40.Scaf100, whole genome
Gene Summary
Adenine Count
1014685 bp
Thymine Count
1018756 bp
Guanine Count
833043 bp
Cytosine Count
826587 bp
Genome Length
3693570 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXB80_01500 | Not Available | Positive | 360339 - 361613 | 47536.6 |
| polygalacturonase | DXB80_01505 | Not Available | Positive | 361685 - 363700 | 71485.8 |
| t9ss c-terminal target domain-containing protein | DXB80_01510 | Not Available | Positive | 363811 - 364266 | 16315.7 |
| b-1,4-endoglucanase | DXB80_01515 | Not Available | Positive | 364263 - 366626 | 88594.5 |
| hypothetical protein | DXB80_01520 | Not Available | Positive | 366633 - 367697 | 40332.3 |
| beta-mannosidase | DXB80_01525 | Not Available | Negative | 368110 - 369393 | 48696.8 |
| glycoside hydrolase family 5 protein | DXB80_01530 | Not Available | Negative | 369535 - 370845 | 49311.1 |
| endoglucanase | DXB80_01535 | Not Available | Negative | 371059 - 372873 | 65418.5 |
| hypothetical protein | DXB80_01545 | Not Available | Negative | 375059 - 376960 | 70524.9 |
| ragb/susd family nutrient uptake outer membrane protein | DXB80_01550 | Not Available | Negative | 376987 - 378687 | 62982.2 |
Pathways
174 pathways
Health Effects
No health effects information available for this bacterium.
