Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Segatella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Segatella |
| Species | Segatella copri |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Segatella copri strain TF06-40 TF06-40.Scaf100, whole genome
Gene Summary
Adenine Count
1014685 bp
Thymine Count
1018756 bp
Guanine Count
833043 bp
Cytosine Count
826587 bp
Genome Length
3693570 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-70 family rna polymerase sigma factor | DXB80_01295 | Not Available | Positive | 309998 - 310873 | 33041.7 |
| hypothetical protein | DXB80_01300 | Not Available | Negative | 311075 - 311749 | 26008.2 |
| mfs transporter | DXB80_01305 | Not Available | Negative | 311872 - 313248 | 49250.7 |
| port family protein | DXB80_01310 | Not Available | Negative | 313311 - 314072 | 28433.2 |
| lysm peptidoglycan-binding domain-containing protein | DXB80_01315 | Not Available | Negative | 314114 - 315508 | 53159.9 |
| gliding motility-associated c-terminal domain-containing protein | DXB80_01320 | Not Available | Positive | 315664 - 316056 | 14951.3 |
| excinuclease abc subunit uvra | DXB80_01325 | Not Available | Positive | 316084 - 318924 | 106252.0 |
| hypothetical protein | DXB80_01335 | Not Available | Positive | 319316 - 319534 | 8741.32 |
| glycoside hydrolase family 15 | DXB80_01340 | Not Available | Negative | 319718 - 320284 | 22255.4 |
| atpase | DXB80_01345 | Not Available | Negative | 320286 - 322451 | 82810.5 |
Pathways
174 pathways
Health Effects
No health effects information available for this bacterium.
