Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Segatella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Segatella |
| Species | Segatella copri |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Segatella copri strain TF06-40 TF06-40.Scaf100, whole genome
Gene Summary
Adenine Count
1014685 bp
Thymine Count
1018756 bp
Guanine Count
833043 bp
Cytosine Count
826587 bp
Genome Length
3693570 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor rpod/siga | DXB80_00040 | Not Available | Positive | 8855 - 9727 | 32703.2 |
| hypothetical protein | DXB80_00045 | Not Available | Positive | 9837 - 11918 | 79945.2 |
| dna helicase uvrd | DXB80_00050 | Not Available | Positive | 11989 - 15201 | 124022.0 |
| pd-(d/e)xk nuclease family protein | DXB80_00055 | Not Available | Positive | 15278 - 18265 | 115455.0 |
| sigma-70 family rna polymerase sigma factor | DXB80_00060 | Not Available | Positive | 18368 - 18985 | 23336.3 |
| arac family transcriptional regulator | DXB80_00065 | Not Available | Negative | 19081 - 19503 | 16555.7 |
| alkaline phosphatase family protein | DXB80_00070 | Not Available | Positive | 19687 - 21597 | 72596.8 |
| phosphatase pap2 family protein | DXB80_00075 | Not Available | Positive | 21668 - 22366 | 27074.6 |
| hypothetical protein | DXB80_00080 | Not Available | Positive | 22473 - 22823 | 12464.7 |
| glutamine--trna ligase/yqey domain fusion protein | DXB80_00085 | Not Available | Positive | 23102 - 24817 | 65950.9 |
Pathways
174 pathways
Health Effects
No health effects information available for this bacterium.
