Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Segatella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Segatella |
| Species | Segatella copri |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Segatella copri strain TF06-40 TF06-40.Scaf100, whole genome
Gene Summary
Adenine Count
1014685 bp
Thymine Count
1018756 bp
Guanine Count
833043 bp
Cytosine Count
826587 bp
Genome Length
3693570 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mobilization protein | DW916_17755 | Not Available | Negative | 3985282 - 3985514 | 8753.82 |
| tolc family protein | DXB80_00005 | Not Available | Positive | 57 - 1391 | 49277.5 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 136 - 248 | Not Available |
| efflux rnd transporter periplasmic adaptor subunit | DXB80_00010 | Not Available | Positive | 1458 - 2639 | 42497.7 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 2041 - 2471 | Not Available |
| abc transporter atp-binding protein | DXB80_00015 | Not Available | Positive | 2651 - 3427 | 28652.1 |
| abc transporter permease | DXB80_00020 | Not Available | Positive | 3532 - 4770 | 44843.6 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | DXB80_00025 | Not Available | Positive | 4944 - 5687 | 27891.3 |
| trna lysidine(34) synthetase tils | DXB80_00030 | Not Available | Positive | 5722 - 7071 | 51228.0 |
| glycosyl hydrolase family 25 | DXB80_00035 | Not Available | Positive | 7677 - 8738 | 40501.5 |
Pathways
174 pathways
Health Effects
No health effects information available for this bacterium.
