Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Segatella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Segatella |
| Species | Segatella copri |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Segatella copri strain TF06-40 TF06-40.Scaf100, whole genome
Gene Summary
Adenine Count
1014685 bp
Thymine Count
1018756 bp
Guanine Count
833043 bp
Cytosine Count
826587 bp
Genome Length
3693570 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent dna helicase recg | DW916_14405 | Not Available | Positive | 3348651 - 3350747 | 79659.9 |
| hypothetical protein | DW916_14410 | Not Available | Positive | 3350872 - 3351192 | 12454.3 |
| lysm peptidoglycan-binding domain-containing protein | DW916_14415 | Not Available | Positive | 3351428 - 3352378 | 35323.0 |
| rip metalloprotease rsep | DW916_14420 | Not Available | Negative | 3352475 - 3353857 | 51957.6 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | DW916_14425 | Not Available | Negative | 3353961 - 3355121 | 42722.5 |
| 16s rrna processing protein rimm | DW916_14430 | Not Available | Negative | 3355133 - 3355654 | 19627.1 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | DW916_14435 | Not Available | Negative | 3355724 - 3357034 | 47716.6 |
| duf4290 domain-containing protein | DW916_14440 | Not Available | Negative | 3357065 - 3357664 | 23196.7 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsab | DW916_14445 | Not Available | Negative | 3357694 - 3358386 | 25249.6 |
| yicc family protein | DW916_14450 | Not Available | Positive | 3358478 - 3359356 | 33549.1 |
Pathways
174 pathways
Health Effects
No health effects information available for this bacterium.
