Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Segatella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Segatella |
| Species | Segatella copri |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Segatella copri strain TF06-40 TF06-40.Scaf100, whole genome
Gene Summary
Adenine Count
1014685 bp
Thymine Count
1018756 bp
Guanine Count
833043 bp
Cytosine Count
826587 bp
Genome Length
3693570 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitroreductase | DXC61_02825 | Not Available | Positive | 723044 - 723565 | 20195.1 |
| helicase | DXC61_02830 | Not Available | Positive | 723624 - 725819 | 83128.0 |
| putative c-s lyase | DXC61_02835 | Not Available | Negative | 725895 - 727067 | 44933.8 |
| plp-dependent transferase | DXC61_02840 | Not Available | Negative | 727149 - 728333 | 43560.1 |
| s9 family peptidase | DXC61_02845 | Not Available | Positive | 728615 - 731164 | 94671.1 |
| mfs transporter | DXC61_02850 | Not Available | Negative | 731265 - 732437 | 42498.7 |
| trna (n(6)-l-threonylcarbamoyladenosine(37)-c(2))- methylthiotransferase mtab | DXC61_02860 | Not Available | Positive | 733141 - 734547 | 52487.6 |
| tigr01212 family radical sam protein | DXC61_02865 | Not Available | Positive | 734615 - 735499 | 34181.9 |
| glycosyltransferase family 2 protein | DXC61_02870 | Not Available | Positive | 735502 - 736518 | 39569.4 |
| duf4861 domain-containing protein | DXC61_02875 | Not Available | Positive | 736546 - 737793 | 46641.3 |
Pathways
174 pathways
Health Effects
No health effects information available for this bacterium.
