Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Segatella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Segatella |
| Species | Segatella copri |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Segatella copri strain TF06-40 TF06-40.Scaf100, whole genome
Gene Summary
Adenine Count
1014685 bp
Thymine Count
1018756 bp
Guanine Count
833043 bp
Cytosine Count
826587 bp
Genome Length
3693570 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucosamine-6-phosphate deaminase | DW916_12340 | Not Available | Negative | 2863003 - 2864994 | 75037.5 |
| rok family protein | DW916_12345 | Not Available | Negative | 2865046 - 2866011 | 33675.8 |
| rok family protein | DW916_12350 | Not Available | Positive | 2866435 - 2867655 | 44569.6 |
| glycoside hydrolase family 29 | DW916_12355 | Not Available | Positive | 2867692 - 2869137 | 54760.0 |
| tonb-dependent receptor | DW916_12360 | Not Available | Positive | 2869190 - 2872189 | 109203.0 |
| ragb/susd family nutrient uptake outer membrane protein | DW916_12365 | Not Available | Positive | 2872218 - 2873927 | 64120.5 |
| duf4976 domain-containing protein | DW916_12370 | Not Available | Positive | 2874192 - 2875838 | 63785.7 |
| arylsulfatase | DW916_12375 | Not Available | Positive | 2875864 - 2876664 | 30452.4 |
| hypothetical protein | DW916_12380 | Not Available | Positive | 2876902 - 2877084 | 5738.28 |
| atp-binding protein | DW916_12385 | Not Available | Negative | 2877563 - 2878768 | 46578.7 |
Pathways
174 pathways
Health Effects
No health effects information available for this bacterium.
