Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Segatella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Segatella |
| Species | Segatella copri |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Segatella copri strain TF06-40 TF06-40.Scaf100, whole genome
Gene Summary
Adenine Count
1014685 bp
Thymine Count
1018756 bp
Guanine Count
833043 bp
Cytosine Count
826587 bp
Genome Length
3693570 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf5114 domain-containing protein | DW916_11920 | Not Available | Positive | 2750922 - 2752322 | 51292.9 |
| arabinogalactan endo-1,4-beta-galactosidase | DW916_11925 | Not Available | Positive | 2752341 - 2753426 | 40379.5 |
| duf4982 domain-containing protein | DW916_11930 | Not Available | Positive | 2753468 - 2755894 | 91356.3 |
| helix-turn-helix domain-containing protein | DW916_11935 | Not Available | Positive | 2756051 - 2758930 | 107533.0 |
| atp-binding protein | DW916_11940 | Not Available | Negative | 2759521 - 2760966 | 55875.7 |
| ragb/susd family nutrient uptake outer membrane protein | DW916_11950 | Not Available | Positive | 2764507 - 2766033 | 58281.2 |
| duf4984 domain-containing protein | DW916_11955 | Not Available | Positive | 2766049 - 2766951 | 33911.2 |
| duf5003 domain-containing protein | DW916_11960 | Not Available | Positive | 2766970 - 2768523 | 56535.2 |
| duf4458 domain-containing protein | DW916_11965 | Not Available | Positive | 2768523 - 2771204 | 100535.0 |
| glycosyltransferase family 2 protein | DW916_11975 | Not Available | Negative | 2773152 - 2773964 | 31316.2 |
Pathways
174 pathways
Health Effects
No health effects information available for this bacterium.
