Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Segatella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Segatella |
| Species | Segatella copri |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Segatella copri strain TF06-40 TF06-40.Scaf100, whole genome
Gene Summary
Adenine Count
1014685 bp
Thymine Count
1018756 bp
Guanine Count
833043 bp
Cytosine Count
826587 bp
Genome Length
3693570 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l9 | DXC61_02625 | Not Available | Positive | 675575 - 676105 | 18551.3 |
| [acyl-carrier-protein] s-malonyltransferase | DXC61_02630 | Not Available | Positive | 676387 - 677274 | 30928.2 |
| alpha-amlyase | DXC61_02635 | Not Available | Positive | 677366 - 679558 | 83924.4 |
| helix-turn-helix domain-containing protein | DXC61_02640 | Not Available | Positive | 680398 - 680664 | 9933.3 |
| ragb/susd family nutrient uptake outer membrane protein | DXC61_02645 | Not Available | Positive | 681316 - 683541 | 82343.2 |
| aaa family atpase | DXC61_02650 | Not Available | Positive | 683882 - 685444 | 60126.7 |
| hypothetical protein | DXC61_02655 | Not Available | Negative | 685596 - 685913 | 11164.4 |
| s9 family peptidase | DXC61_02660 | Not Available | Positive | 686047 - 688134 | 78492.4 |
| ribonuclease e/g | DXC61_02665 | Not Available | Negative | 688229 - 689800 | 59700.4 |
| integration host factor subunit beta | DXC61_02670 | Not Available | Negative | 690081 - 690365 | 10497.8 |
Pathways
174 pathways
Health Effects
No health effects information available for this bacterium.
