Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Segatella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Segatella |
| Species | Segatella copri |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Segatella copri strain TF06-40 TF06-40.Scaf100, whole genome
Gene Summary
Adenine Count
1014685 bp
Thymine Count
1018756 bp
Guanine Count
833043 bp
Cytosine Count
826587 bp
Genome Length
3693570 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | DXC61_02475 | Not Available | Positive | 635484 - 636653 | 44544.6 |
| 3-deoxy-7-phosphoheptulonate synthase | DXC61_02480 | Not Available | Positive | 636681 - 637748 | 39868.1 |
| prephenate dehydrogenase/arogenate dehydrogenase family protein | DXC61_02485 | Not Available | Positive | 637865 - 638662 | 30722.1 |
| nad(p)-dependent oxidoreductase | DXC61_02490 | Not Available | Positive | 639241 - 640560 | 47603.6 |
| hypothetical protein | DXC61_02495 | Not Available | Positive | 641071 - 641691 | 23483.8 |
| signal recognition particle protein | DXC61_02500 | Not Available | Positive | 641834 - 643186 | 49949.2 |
| bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase fold | DXC61_02505 | Not Available | Positive | 643311 - 644189 | 31595.4 |
| alpha-n-arabinofuranosidase | DXC61_02510 | Not Available | Positive | 644359 - 646953 | 96861.6 |
| ompa family protein | DXC61_02515 | Not Available | Positive | 647192 - 648337 | 42046.1 |
| dihydroxy-acid dehydratase | DXC61_02520 | Not Available | Positive | 648721 - 650523 | 64318.1 |
Pathways
174 pathways
Health Effects
No health effects information available for this bacterium.
