Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Segatella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Segatella |
| Species | Segatella copri |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Segatella copri strain TF06-40 TF06-40.Scaf100, whole genome
Gene Summary
Adenine Count
1014685 bp
Thymine Count
1018756 bp
Guanine Count
833043 bp
Cytosine Count
826587 bp
Genome Length
3693570 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetylxylan esterase | DW916_10115 | Not Available | Negative | 2340545 - 2341249 | 26575.6 |
| chromophore lyase | DW916_10120 | Not Available | Negative | 2341262 - 2343781 | 95441.9 |
| ragb/susd family nutrient uptake outer membrane protein | DW916_10125 | Not Available | Negative | 2343900 - 2345696 | 67766.6 |
| tonb-dependent receptor | DW916_10130 | Not Available | Negative | 2345716 - 2348802 | 112745.0 |
| acetyl xylan esterase | DW916_10135 | Not Available | Positive | 2349176 - 2351086 | 71528.8 |
| rpn family recombination-promoting nuclease/putative transposase | DW916_10140 | Not Available | Positive | 2352075 - 2352647 | 22167.0 |
| hypothetical protein | DW916_10145 | Not Available | Positive | 2352658 - 2352866 | 7929.4 |
| hypothetical protein | DW916_10150 | Not Available | Positive | 2353284 - 2353484 | 7814.67 |
| hypothetical protein | DW916_10155 | Not Available | Positive | 2353779 - 2354084 | 11561.2 |
| bax inhibitor (bi)-1/ycca family protein | DW916_10160 | Not Available | Positive | 2354234 - 2354977 | 27100.9 |
Pathways
174 pathways
Health Effects
No health effects information available for this bacterium.
