Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Segatella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Segatella |
| Species | Segatella copri |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Segatella copri strain TF06-40 TF06-40.Scaf100, whole genome
Gene Summary
Adenine Count
1014685 bp
Thymine Count
1018756 bp
Guanine Count
833043 bp
Cytosine Count
826587 bp
Genome Length
3693570 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DW916_09965 | Not Available | Negative | 2291105 - 2294218 | 113811.0 |
| helix-turn-helix domain-containing protein | DW916_09970 | Not Available | Negative | 2294397 - 2295899 | 56926.3 |
| duf4980 domain-containing protein | DW916_09975 | Not Available | Negative | 2296047 - 2297930 | 70768.9 |
| tonb-dependent receptor | DW916_09980 | Not Available | Negative | 2298068 - 2300368 | 86532.3 |
| dna polymerase iv | DW916_09985 | Not Available | Positive | 2300948 - 2302069 | 42521.2 |
| response regulator | DW916_09990 | Not Available | Negative | 2302118 - 2304931 | 105383.0 |
| aspartate ammonia-lyase | DW916_09995 | Not Available | Positive | 2305159 - 2306577 | 51630.2 |
| arac family transcriptional regulator | DW916_10000 | Not Available | Negative | 2306729 - 2307580 | 32897.6 |
| Trna-met | Not Available | Not Available | Positive | 2307821 - 2307897 | Not Available |
| hypothetical protein | DW916_10010 | Not Available | Positive | 2307952 - 2308155 | 8289.38 |
Pathways
174 pathways
Health Effects
No health effects information available for this bacterium.
