Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Segatella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Segatella |
| Species | Segatella copri |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Segatella copri strain TF06-40 TF06-40.Scaf100, whole genome
Gene Summary
Adenine Count
1014685 bp
Thymine Count
1018756 bp
Guanine Count
833043 bp
Cytosine Count
826587 bp
Genome Length
3693570 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ll-diaminopimelate aminotransferase | DW916_08905 | Not Available | Negative | 2051235 - 2052467 | 46281.2 |
| diaminopimelate epimerase | DW916_08910 | Not Available | Negative | 2052645 - 2053490 | 31125.0 |
| hypothetical protein | DW916_08915 | Not Available | Positive | 2053635 - 2053880 | 9824.61 |
| p-ii family nitrogen regulator | DW916_08920 | Not Available | Positive | 2053945 - 2054301 | 13406.2 |
| ammonium transporter | DW916_08925 | Not Available | Positive | 2054403 - 2055671 | 45126.6 |
| helix-turn-helix domain-containing protein | DW916_08930 | Not Available | Positive | 2055883 - 2056866 | 37095.0 |
| crispr-associated endoribonuclease cas6 | DW916_08935 | Not Available | Positive | 2057154 - 2057816 | 25065.3 |
| hypothetical protein | DW916_08940 | Not Available | Positive | 2057835 - 2058389 | 21648.9 |
| crispr-associated helicase cas3' | DW916_08945 | Not Available | Positive | 2058402 - 2060543 | 81213.0 |
| hypothetical protein | DW916_08950 | Not Available | Positive | 2060547 - 2061842 | 49488.1 |
Pathways
174 pathways
Health Effects
No health effects information available for this bacterium.
