Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Segatella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Segatella |
| Species | Segatella copri |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Segatella copri strain TF06-40 TF06-40.Scaf100, whole genome
Gene Summary
Adenine Count
1014685 bp
Thymine Count
1018756 bp
Guanine Count
833043 bp
Cytosine Count
826587 bp
Genome Length
3693570 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trkh family potassium uptake protein | DW916_08750 | Not Available | Negative | 2006674 - 2008131 | 54038.8 |
| trk system potassium transporter trka | DW916_08755 | Not Available | Negative | 2008162 - 2009505 | 49464.5 |
| 1-deoxy-d-xylulose-5-phosphate synthase | DW916_08760 | Not Available | Negative | 2009502 - 2011394 | 69979.2 |
| aminopeptidase | DW916_08765 | Not Available | Positive | 2011573 - 2012979 | 52962.0 |
| serine dehydratase subunit alpha family protein | DW916_08770 | Not Available | Positive | 2013105 - 2014388 | 45565.5 |
| duf4143 domain-containing protein | DW916_08775 | Not Available | Positive | 2014823 - 2016175 | 52657.9 |
| diaminopimelate dehydrogenase | DW916_08780 | Not Available | Negative | 2016283 - 2017182 | 32517.3 |
| heat repeat domain-containing protein | DW916_08785 | Not Available | Negative | 2017619 - 2017960 | 12817.6 |
| hypothetical protein | DW916_08790 | Not Available | Negative | 2017963 - 2018601 | 24857.1 |
| hypothetical protein | DW916_08795 | Not Available | Negative | 2018622 - 2024636 | 223434.0 |
Pathways
174 pathways
Health Effects
No health effects information available for this bacterium.
