Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Segatella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Segatella |
| Species | Segatella copri |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Segatella copri strain TF06-40 TF06-40.Scaf100, whole genome
Gene Summary
Adenine Count
1014685 bp
Thymine Count
1018756 bp
Guanine Count
833043 bp
Cytosine Count
826587 bp
Genome Length
3693570 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidinol dehydrogenase | DW916_08345 | Not Available | Positive | 1914586 - 1915872 | 46699.7 |
| histidinol-phosphate transaminase | DW916_08350 | Not Available | Positive | 1915923 - 1916957 | 39113.1 |
| ygiq family radical sam protein | DW916_08355 | Not Available | Negative | 1917034 - 1919355 | 87832.5 |
| hypothetical protein | DW916_08360 | Not Available | Negative | 1919366 - 1919707 | 12845.3 |
| xanthan lyase | DW916_08365 | Not Available | Negative | 1919743 - 1922391 | 98327.3 |
| acyltransferase | DW916_08370 | Not Available | Negative | 1922482 - 1923039 | 21604.8 |
| hypothetical protein | DW916_08375 | Not Available | Negative | 1923082 - 1923354 | 10112.1 |
| diphosphate--fructose-6-phosphate 1-phosphotransferase | DW916_08380 | Not Available | Positive | 1923549 - 1925198 | 59786.5 |
| glycoside hydrolase family 25 protein | DW916_08385 | Not Available | Positive | 1925265 - 1926116 | 33788.0 |
| 50s ribosomal protein l11 methyltransferase | DW916_08390 | Not Available | Negative | 1926228 - 1927100 | 32422.4 |
Pathways
174 pathways
Health Effects
No health effects information available for this bacterium.
