Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Segatella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Segatella |
| Species | Segatella copri |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Segatella copri strain TF06-40 TF06-40.Scaf100, whole genome
Gene Summary
Adenine Count
1014685 bp
Thymine Count
1018756 bp
Guanine Count
833043 bp
Cytosine Count
826587 bp
Genome Length
3693570 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atpase | DXC61_02170 | Not Available | Positive | 566880 - 567830 | 34901.4 |
| tonb-dependent receptor | DXC61_02175 | Not Available | Positive | 568121 - 571285 | 114660.0 |
| ragb/susd family nutrient uptake outer membrane protein | DXC61_02180 | Not Available | Positive | 571305 - 572981 | 62257.5 |
| hypothetical protein | DXC61_02185 | Not Available | Positive | 573021 - 575120 | 77038.0 |
| hypothetical protein | DXC61_02190 | Not Available | Positive | 575139 - 577772 | 95769.1 |
| glycosyl hydrolase family 5 | DXC61_02195 | Not Available | Positive | 577803 - 579371 | 58484.9 |
| glycoside hydrolase family 5 protein | DXC61_02200 | Not Available | Positive | 579587 - 580900 | 49335.1 |
| beta-mannosidase | DXC61_02205 | Not Available | Positive | 581042 - 582328 | 48759.9 |
| hypothetical protein | DXC61_02210 | Not Available | Positive | 582586 - 582801 | 7961.26 |
| rna-binding s4 domain-containing protein | DXC61_02215 | Not Available | Negative | 582971 - 583393 | 16020.2 |
Pathways
174 pathways
Health Effects
No health effects information available for this bacterium.
