Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Segatella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Segatella |
| Species | Segatella copri |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Segatella copri strain TF06-40 TF06-40.Scaf100, whole genome
Gene Summary
Adenine Count
1014685 bp
Thymine Count
1018756 bp
Guanine Count
833043 bp
Cytosine Count
826587 bp
Genome Length
3693570 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crp/fnr family transcriptional regulator | DW916_05975 | Not Available | Positive | 1502167 - 1502841 | 26008.5 |
| m3 family peptidase | DW916_05980 | Not Available | Positive | 1502937 - 1505024 | 80909.1 |
| cmp deaminase | DW916_05985 | Not Available | Positive | 1505029 - 1505481 | 16829.2 |
| s41 family peptidase | DW916_05990 | Not Available | Positive | 1505527 - 1507254 | 64355.2 |
| 5-formyltetrahydrofolate cyclo-ligase | DW916_05995 | Not Available | Positive | 1507258 - 1507803 | 21040.5 |
| transposase | DW916_06005 | Not Available | Negative | 1508970 - 1509325 | 13278.3 |
| transposase | DW916_06010 | Not Available | Negative | 1509336 - 1509726 | 14833.2 |
| duf1593 domain-containing protein | DW916_06015 | Not Available | Negative | 1510300 - 1511103 | 30100.4 |
| beta-xylosidase | DW916_06020 | Not Available | Negative | 1511346 - 1512845 | 55773.2 |
| hypothetical protein | DW916_06025 | Not Available | Negative | 1513334 - 1514035 | 27232.8 |
Pathways
174 pathways
Health Effects
No health effects information available for this bacterium.
