Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Segatella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Segatella |
| Species | Segatella copri |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Segatella copri strain TF06-40 TF06-40.Scaf100, whole genome
Gene Summary
Adenine Count
1014685 bp
Thymine Count
1018756 bp
Guanine Count
833043 bp
Cytosine Count
826587 bp
Genome Length
3693570 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DW916_05775 | Not Available | Positive | 1453556 - 1456831 | 121865.0 |
| ragb/susd family nutrient uptake outer membrane protein | DW916_05780 | Not Available | Positive | 1456856 - 1458565 | 63165.6 |
| hypothetical protein | DW916_05785 | Not Available | Positive | 1458810 - 1460864 | 73975.2 |
| glycoside hydrolase | DW916_05790 | Not Available | Positive | 1460886 - 1462676 | 67408.9 |
| alpha-amylase | DW916_05795 | Not Available | Negative | 1462789 - 1464222 | 54372.6 |
| glycosyltransferase family 1 protein | DW916_05800 | Not Available | Negative | 1464260 - 1465528 | 48013.3 |
| 4-alpha-glucanotransferase | DW916_05805 | Not Available | Negative | 1465547 - 1467490 | 74681.9 |
| crp/fnr family transcriptional regulator | DW916_05810 | Not Available | Positive | 1467703 - 1468407 | 26562.6 |
| lipid kinase | DW916_05815 | Not Available | Negative | 1468485 - 1469414 | 35400.6 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | DW916_05820 | Not Available | Negative | 1469522 - 1470490 | 36575.2 |
Pathways
174 pathways
Health Effects
No health effects information available for this bacterium.
