Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Segatella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Segatella |
| Species | Segatella copri |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Segatella copri strain TF06-40 TF06-40.Scaf100, whole genome
Gene Summary
Adenine Count
1014685 bp
Thymine Count
1018756 bp
Guanine Count
833043 bp
Cytosine Count
826587 bp
Genome Length
3693570 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribulose-phosphate 3-epimerase | DW916_05715 | Not Available | Positive | 1431380 - 1432033 | 23835.2 |
| rna polymerase subunit sigma-24 | DW916_05720 | Not Available | Negative | 1432030 - 1432626 | 23028.7 |
| glycoside hydrolase | DW916_05725 | Not Available | Positive | 1432910 - 1435534 | 99243.3 |
| hypothetical protein | DW916_05735 | Not Available | Negative | 1437542 - 1438192 | 22757.1 |
| pectin esterase | DW916_05745 | Not Available | Positive | 1440662 - 1444081 | 123036.0 |
| tonb-dependent receptor | DW916_05750 | Not Available | Positive | 1444517 - 1447765 | 119081.0 |
| ragb/susd family nutrient uptake outer membrane protein | DW916_05755 | Not Available | Positive | 1447786 - 1449729 | 72009.0 |
| duf5123 domain-containing protein | DW916_05760 | Not Available | Positive | 1449759 - 1451447 | 60849.9 |
| rpn family recombination-promoting nuclease/putative transposase | DW916_05765 | Not Available | Positive | 1451617 - 1452465 | 33411.0 |
| hypothetical protein | DW916_05770 | Not Available | Positive | 1452521 - 1452808 | 11040.3 |
Pathways
174 pathways
Health Effects
No health effects information available for this bacterium.
