Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Segatella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Segatella |
| Species | Segatella copri |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Segatella copri strain TF06-40 TF06-40.Scaf100, whole genome
Gene Summary
Adenine Count
1014685 bp
Thymine Count
1018756 bp
Guanine Count
833043 bp
Cytosine Count
826587 bp
Genome Length
3693570 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| b-1,4-endoglucanase | DW916_05350 | Not Available | Positive | 1331675 - 1334038 | 88582.4 |
| hypothetical protein | DW916_05355 | Not Available | Positive | 1334045 - 1335109 | 40321.4 |
| beta-mannosidase | DW916_05360 | Not Available | Negative | 1335518 - 1336804 | 48781.9 |
| glycoside hydrolase family 5 protein | DW916_05365 | Not Available | Negative | 1336947 - 1338260 | 49468.2 |
| endoglucanase | DW916_05370 | Not Available | Negative | 1338477 - 1340291 | 65217.4 |
| hypothetical protein | DW916_05380 | Not Available | Negative | 1342477 - 1344378 | 70523.9 |
| ragb/susd family nutrient uptake outer membrane protein | DW916_05385 | Not Available | Negative | 1344405 - 1346105 | 63011.2 |
| tonb-dependent receptor | DW916_05390 | Not Available | Negative | 1346124 - 1349297 | 115848.0 |
| atpase | DW916_05395 | Not Available | Negative | 1349587 - 1350537 | 34961.4 |
| mechanosensitive ion channel family protein | DW916_05400 | Not Available | Positive | 1350714 - 1353074 | 90557.0 |
Pathways
174 pathways
Health Effects
No health effects information available for this bacterium.
