Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Segatella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Segatella |
| Species | Segatella copri |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Segatella copri strain TF06-40 TF06-40.Scaf100, whole genome
Gene Summary
Adenine Count
1014685 bp
Thymine Count
1018756 bp
Guanine Count
833043 bp
Cytosine Count
826587 bp
Genome Length
3693570 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acyl-d-glucosamine 2-epimerase | DW916_05300 | Not Available | Negative | 1315386 - 1316546 | 45543.4 |
| sugar transporter | DW916_05305 | Not Available | Negative | 1316609 - 1317952 | 49384.4 |
| glycosidase | DW916_05310 | Not Available | Negative | 1318076 - 1319248 | 44284.4 |
| beta-mannosidase | DW916_05315 | Not Available | Negative | 1319337 - 1320440 | 41343.3 |
| acetylxylan esterase | DW916_05320 | Not Available | Negative | 1320502 - 1321842 | 50215.8 |
| tonb-dependent receptor | DW916_05325 | Not Available | Positive | 1322564 - 1325872 | 121346.0 |
| ragb/susd family nutrient uptake outer membrane protein | DW916_05330 | Not Available | Positive | 1325898 - 1327694 | 67778.4 |
| hypothetical protein | DW916_05335 | Not Available | Positive | 1327753 - 1329027 | 47533.6 |
| polygalacturonase | DW916_05340 | Not Available | Positive | 1329099 - 1331111 | 71606.1 |
| t9ss c-terminal target domain-containing protein | DW916_05345 | Not Available | Positive | 1331226 - 1331678 | 16186.6 |
Pathways
174 pathways
Health Effects
No health effects information available for this bacterium.
